Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb8Q91XZ2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb8Q91XZ2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb8Q91XZ2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb8Q91XZ2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb8Q91XZ2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb8Q91XZ2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb8Q91XZ2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhb8Q91XZ2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb8Q91XZ2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb8Q91XZ2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Gm7417-201ENSMUST00000192950 473 ntBASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb8Q91XZ2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb8Q91XZ2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb8Q91XZ2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb8Q91XZ2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhb8Q91XZ2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb8Q91XZ2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb8Q91XZ2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhb8Q91XZ2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb8Q91XZ2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb8Q91XZ2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb8Q91XZ2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.64■□□□□ 0.73
Pcdhb8Q91XZ2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb8Q91XZ2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb8Q91XZ2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb8Q91XZ2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb8Q91XZ2 Etf1-202ENSMUST00000180351 108 ntBASIC19.63■□□□□ 0.73
Pcdhb8Q91XZ2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb8Q91XZ2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb8Q91XZ2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb8Q91XZ2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms