Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4aQ8VEJ9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4aQ8VEJ9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps4aQ8VEJ9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vps4aQ8VEJ9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps4aQ8VEJ9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps4aQ8VEJ9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps4aQ8VEJ9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps4aQ8VEJ9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps4aQ8VEJ9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vps4aQ8VEJ9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vps4aQ8VEJ9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4aQ8VEJ9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms