Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.35■□□□□ 0.85
Slf1Q8R3P9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slf1Q8R3P9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slf1Q8R3P9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slf1Q8R3P9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.34■□□□□ 0.85
Slf1Q8R3P9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slf1Q8R3P9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slf1Q8R3P9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slf1Q8R3P9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slf1Q8R3P9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slf1Q8R3P9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slf1Q8R3P9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slf1Q8R3P9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slf1Q8R3P9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slf1Q8R3P9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.32■□□□□ 0.84
Slf1Q8R3P9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slf1Q8R3P9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.32■□□□□ 0.84
Slf1Q8R3P9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slf1Q8R3P9 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.32■□□□□ 0.84
Slf1Q8R3P9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.31■□□□□ 0.84
Slf1Q8R3P9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slf1Q8R3P9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Slf1Q8R3P9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slf1Q8R3P9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slf1Q8R3P9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slf1Q8R3P9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Golph3-205ENSMUST00000228671 2842 ntBASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slf1Q8R3P9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slf1Q8R3P9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slf1Q8R3P9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slf1Q8R3P9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slf1Q8R3P9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.27■□□□□ 0.84
Slf1Q8R3P9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.26■□□□□ 0.83
Slf1Q8R3P9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slf1Q8R3P9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slf1Q8R3P9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slf1Q8R3P9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slf1Q8R3P9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Slf1Q8R3P9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slf1Q8R3P9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.25■□□□□ 0.83
Slf1Q8R3P9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slf1Q8R3P9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms