Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Defb35Q8R2I3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Defb35Q8R2I3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Defb35Q8R2I3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Defb35Q8R2I3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Defb35Q8R2I3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Defb35Q8R2I3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.41■□□□□ 0.7
Defb35Q8R2I3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb35Q8R2I3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.4■□□□□ 0.7
Defb35Q8R2I3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Defb35Q8R2I3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Defb35Q8R2I3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb35Q8R2I3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Defb35Q8R2I3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Defb35Q8R2I3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Defb35Q8R2I3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Defb35Q8R2I3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Defb35Q8R2I3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Defb35Q8R2I3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.34■□□□□ 0.69
Defb35Q8R2I3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Defb35Q8R2I3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Defb35Q8R2I3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.34■□□□□ 0.69
Defb35Q8R2I3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
Defb35Q8R2I3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Defb35Q8R2I3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Defb35Q8R2I3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Defb35Q8R2I3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Defb35Q8R2I3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
Defb35Q8R2I3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Defb35Q8R2I3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms