Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col23a1Q8K4G2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Col23a1Q8K4G2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Col23a1Q8K4G2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Col23a1Q8K4G2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Col23a1Q8K4G2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
Col23a1Q8K4G2 Mir5133-201ENSMUST00000174955 77 ntBASIC25.11■■□□□ 1.61
Col23a1Q8K4G2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC25.11■■□□□ 1.61
Col23a1Q8K4G2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Col23a1Q8K4G2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col23a1Q8K4G2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Col23a1Q8K4G2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Col23a1Q8K4G2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Col23a1Q8K4G2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Col23a1Q8K4G2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Col23a1Q8K4G2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Col23a1Q8K4G2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Col23a1Q8K4G2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC25.08■■□□□ 1.61
Col23a1Q8K4G2 Gm42555-201ENSMUST00000199304 1039 ntBASIC25.08■■□□□ 1.61
Col23a1Q8K4G2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Col23a1Q8K4G2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Col23a1Q8K4G2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Col23a1Q8K4G2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col23a1Q8K4G2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Col23a1Q8K4G2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Col23a1Q8K4G2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Col23a1Q8K4G2 Mir7071-201ENSMUST00000184847 69 ntBASIC25.06■■□□□ 1.6
Col23a1Q8K4G2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.06■■□□□ 1.6
Col23a1Q8K4G2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Gm8520-201ENSMUST00000186517 868 ntBASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col23a1Q8K4G2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Col23a1Q8K4G2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Col23a1Q8K4G2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.03■■□□□ 1.6
Col23a1Q8K4G2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Col23a1Q8K4G2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Col23a1Q8K4G2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Col23a1Q8K4G2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col23a1Q8K4G2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col23a1Q8K4G2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC25.01■■□□□ 1.59
Col23a1Q8K4G2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Col23a1Q8K4G2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Col23a1Q8K4G2 Gm3807-201ENSMUST00000193520 1168 ntBASIC25■■□□□ 1.59
Col23a1Q8K4G2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Col23a1Q8K4G2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
Col23a1Q8K4G2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col23a1Q8K4G2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col23a1Q8K4G2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 AC158538.1-201ENSMUST00000225870 294 ntBASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col23a1Q8K4G2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.98■■□□□ 1.59
Col23a1Q8K4G2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
Col23a1Q8K4G2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.98■■□□□ 1.59
Col23a1Q8K4G2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Col23a1Q8K4G2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms