Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8aQ8K442 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8aQ8K442 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8aQ8K442 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8aQ8K442 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC28.69■■■□□ 2.18
Abca8aQ8K442 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8aQ8K442 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Abca8aQ8K442 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8aQ8K442 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8aQ8K442 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8aQ8K442 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Abca8aQ8K442 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8aQ8K442 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8aQ8K442 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Abca8aQ8K442 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC28.66■■■□□ 2.18
Abca8aQ8K442 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Abca8aQ8K442 Gm44949-201ENSMUST00000206423 1450 ntBASIC28.66■■■□□ 2.18
Abca8aQ8K442 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC28.65■■■□□ 2.18
Abca8aQ8K442 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Abca8aQ8K442 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Abca8aQ8K442 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Abca8aQ8K442 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Abca8aQ8K442 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Abca8aQ8K442 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Abca8aQ8K442 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Abca8aQ8K442 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC28.64■■■□□ 2.17
Abca8aQ8K442 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8aQ8K442 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8aQ8K442 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8aQ8K442 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8aQ8K442 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Abca8aQ8K442 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC28.62■■■□□ 2.17
Abca8aQ8K442 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8aQ8K442 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Abca8aQ8K442 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8aQ8K442 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Abca8aQ8K442 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
Abca8aQ8K442 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8aQ8K442 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8aQ8K442 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Abca8aQ8K442 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC28.61■■■□□ 2.17
Abca8aQ8K442 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
Abca8aQ8K442 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC28.61■■■□□ 2.17
Abca8aQ8K442 Gm27011-201ENSMUST00000182352 972 ntBASIC28.61■■■□□ 2.17
Abca8aQ8K442 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
Abca8aQ8K442 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Abca8aQ8K442 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Abca8aQ8K442 Gm42642-201ENSMUST00000200683 355 ntBASIC28.6■■■□□ 2.17
Abca8aQ8K442 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8aQ8K442 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Abca8aQ8K442 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8aQ8K442 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC28.58■■■□□ 2.17
Abca8aQ8K442 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8aQ8K442 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8aQ8K442 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8aQ8K442 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Abca8aQ8K442 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
Abca8aQ8K442 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Abca8aQ8K442 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Abca8aQ8K442 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC28.57■■■□□ 2.16
Abca8aQ8K442 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Abca8aQ8K442 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Abca8aQ8K442 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Abca8aQ8K442 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Abca8aQ8K442 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Abca8aQ8K442 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Abca8aQ8K442 Mir6236-201ENSMUST00000184437 123 ntBASIC28.54■■■□□ 2.16
Abca8aQ8K442 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Abca8aQ8K442 Gm14281-201ENSMUST00000121700 1294 ntBASIC28.54■■■□□ 2.16
Abca8aQ8K442 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC28.54■■■□□ 2.16
Abca8aQ8K442 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Abca8aQ8K442 Gm18671-201ENSMUST00000214826 683 ntBASIC28.54■■■□□ 2.16
Abca8aQ8K442 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC28.54■■■□□ 2.16
Abca8aQ8K442 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8aQ8K442 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8aQ8K442 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8aQ8K442 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC28.53■■■□□ 2.16
Abca8aQ8K442 AV356131-201ENSMUST00000206201 750 ntBASIC28.53■■■□□ 2.16
Abca8aQ8K442 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Abca8aQ8K442 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Abca8aQ8K442 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Abca8aQ8K442 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Abca8aQ8K442 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC28.52■■■□□ 2.16
Abca8aQ8K442 AC112142.1-201ENSMUST00000228796 918 ntBASIC28.52■■■□□ 2.16
Abca8aQ8K442 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms