Protein–RNA interactions for Protein: Q8K284

Gtf3c1, General transcription factor 3C polypeptide 1, mousemouse

Predictions only

Length 2,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1Q8K284 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c1Q8K284 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gtf3c1Q8K284 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gtf3c1Q8K284 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.66■□□□□ 0.74
Gtf3c1Q8K284 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.66■□□□□ 0.74
Gtf3c1Q8K284 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf3c1Q8K284 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gtf3c1Q8K284 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.64■□□□□ 0.74
Gtf3c1Q8K284 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.64■□□□□ 0.73
Gtf3c1Q8K284 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c1Q8K284 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.64■□□□□ 0.73
Gtf3c1Q8K284 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c1Q8K284 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c1Q8K284 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c1Q8K284 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c1Q8K284 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf3c1Q8K284 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf3c1Q8K284 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Reep4-203ENSMUST00000226563 1444 ntBASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf3c1Q8K284 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Gtf3c1Q8K284 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c1Q8K284 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c1Q8K284 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c1Q8K284 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c1Q8K284 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gtf3c1Q8K284 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gtf3c1Q8K284 Gm13234-201ENSMUST00000120010 747 ntBASIC19.58■□□□□ 0.72
Gtf3c1Q8K284 Gm12441-201ENSMUST00000121806 588 ntBASIC19.58■□□□□ 0.72
Gtf3c1Q8K284 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.58■□□□□ 0.72
Gtf3c1Q8K284 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gtf3c1Q8K284 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms