Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.31■□□□□ 0.68
Hmgcs1Q8JZK9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hmgcs1Q8JZK9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmgcs1Q8JZK9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgcs1Q8JZK9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hmgcs1Q8JZK9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgcs1Q8JZK9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgcs1Q8JZK9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmgcs1Q8JZK9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
Hmgcs1Q8JZK9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgcs1Q8JZK9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgcs1Q8JZK9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmgcs1Q8JZK9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgcs1Q8JZK9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgcs1Q8JZK9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmgcs1Q8JZK9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmgcs1Q8JZK9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmgcs1Q8JZK9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Hmgcs1Q8JZK9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmgcs1Q8JZK9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hmgcs1Q8JZK9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmgcs1Q8JZK9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmgcs1Q8JZK9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmgcs1Q8JZK9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hmgcs1Q8JZK9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms