Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim61Q8JZK6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim61Q8JZK6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim61Q8JZK6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim61Q8JZK6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim61Q8JZK6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.3■■□□□ 1
Trim61Q8JZK6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim61Q8JZK6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim61Q8JZK6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim61Q8JZK6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim61Q8JZK6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.29■■□□□ 1
Trim61Q8JZK6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim61Q8JZK6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.29■■□□□ 1
Trim61Q8JZK6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim61Q8JZK6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim61Q8JZK6 Gm5874-201ENSMUST00000096101 508 ntBASIC21.29■■□□□ 1
Trim61Q8JZK6 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.29■■□□□ 1
Trim61Q8JZK6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim61Q8JZK6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Trim61Q8JZK6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim61Q8JZK6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim61Q8JZK6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim61Q8JZK6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim61Q8JZK6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim61Q8JZK6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim61Q8JZK6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim61Q8JZK6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim61Q8JZK6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.27■■□□□ 1
Trim61Q8JZK6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim61Q8JZK6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim61Q8JZK6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim61Q8JZK6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim61Q8JZK6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Gm26833-201ENSMUST00000180899 440 ntBASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.26■□□□□ 0.99
Trim61Q8JZK6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim61Q8JZK6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.25■□□□□ 0.99
Trim61Q8JZK6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim61Q8JZK6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim61Q8JZK6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim61Q8JZK6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim61Q8JZK6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim61Q8JZK6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim61Q8JZK6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim61Q8JZK6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim61Q8JZK6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim61Q8JZK6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim61Q8JZK6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim61Q8JZK6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim61Q8JZK6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Trim61Q8JZK6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim61Q8JZK6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim61Q8JZK6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Trim61Q8JZK6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim61Q8JZK6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim61Q8JZK6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.21■□□□□ 0.99
Trim61Q8JZK6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim61Q8JZK6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim61Q8JZK6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim61Q8JZK6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim61Q8JZK6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms