Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trpm6Q8CIR4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trpm6Q8CIR4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trpm6Q8CIR4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm6Q8CIR4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.44■□□□□ 0.86
Trpm6Q8CIR4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm6Q8CIR4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.44■□□□□ 0.86
Trpm6Q8CIR4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.44■□□□□ 0.86
Trpm6Q8CIR4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trpm6Q8CIR4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm6Q8CIR4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm6Q8CIR4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm6Q8CIR4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm6Q8CIR4 Gm29257-201ENSMUST00000186115 639 ntBASIC20.43■□□□□ 0.86
Trpm6Q8CIR4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trpm6Q8CIR4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trpm6Q8CIR4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trpm6Q8CIR4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trpm6Q8CIR4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trpm6Q8CIR4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trpm6Q8CIR4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trpm6Q8CIR4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trpm6Q8CIR4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.41■□□□□ 0.86
Trpm6Q8CIR4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trpm6Q8CIR4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trpm6Q8CIR4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trpm6Q8CIR4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trpm6Q8CIR4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Gm10849-201ENSMUST00000100397 618 ntBASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.4■□□□□ 0.86
Trpm6Q8CIR4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trpm6Q8CIR4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.39■□□□□ 0.86
Trpm6Q8CIR4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trpm6Q8CIR4 Gm27405-201ENSMUST00000184201 112 ntBASIC20.39■□□□□ 0.86
Trpm6Q8CIR4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trpm6Q8CIR4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Trpm6Q8CIR4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trpm6Q8CIR4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trpm6Q8CIR4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Gm7291-201ENSMUST00000199147 382 ntBASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trpm6Q8CIR4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trpm6Q8CIR4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Gm42642-201ENSMUST00000200683 355 ntBASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Gm10033-202ENSMUST00000211874 928 ntBASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms