Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Depdc1aQ8CIG0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Depdc1aQ8CIG0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Depdc1aQ8CIG0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.95■■□□□ 1.26
Depdc1aQ8CIG0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Depdc1aQ8CIG0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
Depdc1aQ8CIG0 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.95■■□□□ 1.26
Depdc1aQ8CIG0 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.95■■□□□ 1.26
Depdc1aQ8CIG0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Depdc1aQ8CIG0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Depdc1aQ8CIG0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.94■■□□□ 1.26
Depdc1aQ8CIG0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Depdc1aQ8CIG0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Mir6236-201ENSMUST00000184437 123 ntBASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Depdc1aQ8CIG0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Depdc1aQ8CIG0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
Depdc1aQ8CIG0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.91■■□□□ 1.26
Depdc1aQ8CIG0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
Depdc1aQ8CIG0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.91■■□□□ 1.26
Depdc1aQ8CIG0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Depdc1aQ8CIG0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Depdc1aQ8CIG0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.9■■□□□ 1.26
Depdc1aQ8CIG0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Depdc1aQ8CIG0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Depdc1aQ8CIG0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Depdc1aQ8CIG0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Depdc1aQ8CIG0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Depdc1aQ8CIG0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Depdc1aQ8CIG0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Depdc1aQ8CIG0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Depdc1aQ8CIG0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Depdc1aQ8CIG0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Depdc1aQ8CIG0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Depdc1aQ8CIG0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Depdc1aQ8CIG0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms