Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps50Q8CI71 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.69■□□□□ 0.74
Vps50Q8CI71 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.69■□□□□ 0.74
Vps50Q8CI71 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps50Q8CI71 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps50Q8CI71 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps50Q8CI71 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps50Q8CI71 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps50Q8CI71 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps50Q8CI71 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.68■□□□□ 0.74
Vps50Q8CI71 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.68■□□□□ 0.74
Vps50Q8CI71 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps50Q8CI71 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps50Q8CI71 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps50Q8CI71 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Gm15039-201ENSMUST00000118914 875 ntBASIC19.67■□□□□ 0.74
Vps50Q8CI71 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps50Q8CI71 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Vps50Q8CI71 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.66■□□□□ 0.74
Vps50Q8CI71 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps50Q8CI71 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.65■□□□□ 0.74
Vps50Q8CI71 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.65■□□□□ 0.74
Vps50Q8CI71 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps50Q8CI71 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps50Q8CI71 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps50Q8CI71 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps50Q8CI71 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Vps50Q8CI71 Gm22238-201ENSMUST00000175222 88 ntBASIC19.64■□□□□ 0.73
Vps50Q8CI71 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.64■□□□□ 0.73
Vps50Q8CI71 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Vps50Q8CI71 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.64■□□□□ 0.73
Vps50Q8CI71 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps50Q8CI71 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps50Q8CI71 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.63■□□□□ 0.73
Vps50Q8CI71 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vps50Q8CI71 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.62■□□□□ 0.73
Vps50Q8CI71 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps50Q8CI71 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Vps50Q8CI71 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms