Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mmp28Q8CGV8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Mir6538-201ENSMUST00000183713 110 ntBASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp28Q8CGV8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Mmp28Q8CGV8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Mmp28Q8CGV8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms