Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm10493-201ENSMUST00000097270 612 ntBASIC19.77■□□□□ 0.76
Rab43Q8CG50 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab43Q8CG50 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab43Q8CG50 Gm40848-201ENSMUST00000221998 324 ntBASIC19.76■□□□□ 0.75
Rab43Q8CG50 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.76■□□□□ 0.75
Rab43Q8CG50 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab43Q8CG50 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab43Q8CG50 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rab43Q8CG50 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.74■□□□□ 0.75
Rab43Q8CG50 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.74■□□□□ 0.75
Rab43Q8CG50 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.74■□□□□ 0.75
Rab43Q8CG50 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.74■□□□□ 0.75
Rab43Q8CG50 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Smad6-203ENSMUST00000179458 273 ntBASIC19.73■□□□□ 0.75
Rab43Q8CG50 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab43Q8CG50 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab43Q8CG50 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rab43Q8CG50 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rab43Q8CG50 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab43Q8CG50 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.69■□□□□ 0.74
Rab43Q8CG50 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.69■□□□□ 0.74
Rab43Q8CG50 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab43Q8CG50 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.69■□□□□ 0.74
Rab43Q8CG50 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.69■□□□□ 0.74
Rab43Q8CG50 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.69■□□□□ 0.74
Rab43Q8CG50 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rab43Q8CG50 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.68■□□□□ 0.74
Rab43Q8CG50 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab43Q8CG50 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab43Q8CG50 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab43Q8CG50 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab43Q8CG50 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.67■□□□□ 0.74
Rab43Q8CG50 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab43Q8CG50 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms