Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SynpoQ8CC35 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SynpoQ8CC35 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.44■□□□□ 0.7
SynpoQ8CC35 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.44■□□□□ 0.7
SynpoQ8CC35 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.44■□□□□ 0.7
SynpoQ8CC35 Golgb1-201ENSMUST00000023534 498 ntBASIC19.44■□□□□ 0.7
SynpoQ8CC35 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SynpoQ8CC35 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SynpoQ8CC35 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SynpoQ8CC35 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SynpoQ8CC35 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SynpoQ8CC35 Gm12821-201ENSMUST00000120022 600 ntBASIC19.43■□□□□ 0.7
SynpoQ8CC35 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.43■□□□□ 0.7
SynpoQ8CC35 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SynpoQ8CC35 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SynpoQ8CC35 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SynpoQ8CC35 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SynpoQ8CC35 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SynpoQ8CC35 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SynpoQ8CC35 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.42■□□□□ 0.7
SynpoQ8CC35 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
SynpoQ8CC35 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.42■□□□□ 0.7
SynpoQ8CC35 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.42■□□□□ 0.7
SynpoQ8CC35 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.42■□□□□ 0.7
SynpoQ8CC35 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SynpoQ8CC35 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SynpoQ8CC35 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SynpoQ8CC35 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SynpoQ8CC35 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SynpoQ8CC35 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SynpoQ8CC35 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SynpoQ8CC35 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SynpoQ8CC35 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.41■□□□□ 0.7
SynpoQ8CC35 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SynpoQ8CC35 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SynpoQ8CC35 Notumos-201ENSMUST00000151998 2659 ntBASIC19.4■□□□□ 0.7
SynpoQ8CC35 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SynpoQ8CC35 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SynpoQ8CC35 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.4■□□□□ 0.7
SynpoQ8CC35 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SynpoQ8CC35 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SynpoQ8CC35 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SynpoQ8CC35 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.39■□□□□ 0.69
SynpoQ8CC35 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SynpoQ8CC35 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SynpoQ8CC35 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SynpoQ8CC35 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SynpoQ8CC35 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.38■□□□□ 0.69
SynpoQ8CC35 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SynpoQ8CC35 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SynpoQ8CC35 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SynpoQ8CC35 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.36■□□□□ 0.69
SynpoQ8CC35 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SynpoQ8CC35 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SynpoQ8CC35 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SynpoQ8CC35 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SynpoQ8CC35 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SynpoQ8CC35 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SynpoQ8CC35 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SynpoQ8CC35 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SynpoQ8CC35 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SynpoQ8CC35 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SynpoQ8CC35 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SynpoQ8CC35 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SynpoQ8CC35 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SynpoQ8CC35 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.33■□□□□ 0.69
SynpoQ8CC35 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SynpoQ8CC35 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SynpoQ8CC35 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SynpoQ8CC35 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SynpoQ8CC35 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SynpoQ8CC35 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms