Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.33■■□□□ 1
Uba3Q8C878 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Uba3Q8C878 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uba3Q8C878 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Uba3Q8C878 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uba3Q8C878 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Uba3Q8C878 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Uba3Q8C878 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Uba3Q8C878 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Uba3Q8C878 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uba3Q8C878 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Uba3Q8C878 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uba3Q8C878 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Uba3Q8C878 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uba3Q8C878 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.31■■□□□ 1
Uba3Q8C878 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uba3Q8C878 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.31■■□□□ 1
Uba3Q8C878 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Uba3Q8C878 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uba3Q8C878 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Uba3Q8C878 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uba3Q8C878 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.3■■□□□ 1
Uba3Q8C878 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uba3Q8C878 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uba3Q8C878 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Uba3Q8C878 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uba3Q8C878 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.29■■□□□ 1
Uba3Q8C878 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Uba3Q8C878 Gm21956-201ENSMUST00000179946 522 ntBASIC21.29■■□□□ 1
Uba3Q8C878 Gm43530-201ENSMUST00000195920 274 ntBASIC21.29■■□□□ 1
Uba3Q8C878 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Uba3Q8C878 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.29■■□□□ 1
Uba3Q8C878 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Uba3Q8C878 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Uba3Q8C878 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.28■■□□□ 1
Uba3Q8C878 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uba3Q8C878 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.28■■□□□ 1
Uba3Q8C878 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Uba3Q8C878 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uba3Q8C878 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.28■■□□□ 1
Uba3Q8C878 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Uba3Q8C878 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.28■■□□□ 1
Uba3Q8C878 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uba3Q8C878 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uba3Q8C878 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uba3Q8C878 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Uba3Q8C878 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uba3Q8C878 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uba3Q8C878 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Uba3Q8C878 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.27■■□□□ 1
Uba3Q8C878 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.27■■□□□ 1
Uba3Q8C878 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.27■■□□□ 1
Uba3Q8C878 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.27■■□□□ 1
Uba3Q8C878 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Uba3Q8C878 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Uba3Q8C878 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Uba3Q8C878 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Uba3Q8C878 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Uba3Q8C878 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Uba3Q8C878 Gm13241-201ENSMUST00000094493 780 ntBASIC21.25■□□□□ 0.99
Uba3Q8C878 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Uba3Q8C878 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uba3Q8C878 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.24■□□□□ 0.99
Uba3Q8C878 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uba3Q8C878 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uba3Q8C878 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uba3Q8C878 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.24■□□□□ 0.99
Uba3Q8C878 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.24■□□□□ 0.99
Uba3Q8C878 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Uba3Q8C878 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Uba3Q8C878 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uba3Q8C878 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Uba3Q8C878 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uba3Q8C878 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uba3Q8C878 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Uba3Q8C878 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.23■□□□□ 0.99
Uba3Q8C878 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uba3Q8C878 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uba3Q8C878 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uba3Q8C878 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Uba3Q8C878 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uba3Q8C878 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uba3Q8C878 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.22■□□□□ 0.99
Uba3Q8C878 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.22■□□□□ 0.99
Uba3Q8C878 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uba3Q8C878 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.22■□□□□ 0.99
Uba3Q8C878 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uba3Q8C878 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Uba3Q8C878 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Uba3Q8C878 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms