Protein–RNA interactions for Protein: Q8C1C8

Pnma1, Paraneoplastic antigen Ma1 homolog, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnma1Q8C1C8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pnma1Q8C1C8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pnma1Q8C1C8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pnma1Q8C1C8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pnma1Q8C1C8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pnma1Q8C1C8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.33■■□□□ 1.17
Pnma1Q8C1C8 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.33■■□□□ 1.17
Pnma1Q8C1C8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Pnma1Q8C1C8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Pnma1Q8C1C8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pnma1Q8C1C8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Pnma1Q8C1C8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pnma1Q8C1C8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pnma1Q8C1C8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.32■■□□□ 1.16
Pnma1Q8C1C8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pnma1Q8C1C8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pnma1Q8C1C8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pnma1Q8C1C8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pnma1Q8C1C8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pnma1Q8C1C8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.3■■□□□ 1.16
Pnma1Q8C1C8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pnma1Q8C1C8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
Pnma1Q8C1C8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.3■■□□□ 1.16
Pnma1Q8C1C8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.3■■□□□ 1.16
Pnma1Q8C1C8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
Pnma1Q8C1C8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pnma1Q8C1C8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pnma1Q8C1C8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Pnma1Q8C1C8 Mir7075-201ENSMUST00000184187 82 ntBASIC22.29■■□□□ 1.16
Pnma1Q8C1C8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Pnma1Q8C1C8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pnma1Q8C1C8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.28■■□□□ 1.16
Pnma1Q8C1C8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pnma1Q8C1C8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.28■■□□□ 1.16
Pnma1Q8C1C8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pnma1Q8C1C8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pnma1Q8C1C8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pnma1Q8C1C8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Pnma1Q8C1C8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pnma1Q8C1C8 Gm6139-201ENSMUST00000079261 882 ntBASIC22.27■■□□□ 1.16
Pnma1Q8C1C8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pnma1Q8C1C8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Pnma1Q8C1C8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pnma1Q8C1C8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pnma1Q8C1C8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pnma1Q8C1C8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pnma1Q8C1C8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pnma1Q8C1C8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pnma1Q8C1C8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pnma1Q8C1C8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Gm12251-201ENSMUST00000117893 792 ntBASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pnma1Q8C1C8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pnma1Q8C1C8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pnma1Q8C1C8 Mir6236-201ENSMUST00000184437 123 ntBASIC22.21■■□□□ 1.15
Pnma1Q8C1C8 Serp2-204ENSMUST00000228055 705 ntBASIC22.21■■□□□ 1.15
Pnma1Q8C1C8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pnma1Q8C1C8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pnma1Q8C1C8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pnma1Q8C1C8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms