Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps9d1Q8C190 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Gm43566-201ENSMUST00000196851 808 ntBASIC18.85■□□□□ 0.61
Vps9d1Q8C190 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vps9d1Q8C190 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps9d1Q8C190 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.84■□□□□ 0.61
Vps9d1Q8C190 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps9d1Q8C190 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps9d1Q8C190 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps9d1Q8C190 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps9d1Q8C190 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps9d1Q8C190 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Vps9d1Q8C190 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps9d1Q8C190 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Vps9d1Q8C190 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps9d1Q8C190 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps9d1Q8C190 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.83■□□□□ 0.6
Vps9d1Q8C190 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps9d1Q8C190 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps9d1Q8C190 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps9d1Q8C190 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps9d1Q8C190 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps9d1Q8C190 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps9d1Q8C190 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.8■□□□□ 0.6
Vps9d1Q8C190 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vps9d1Q8C190 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps9d1Q8C190 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps9d1Q8C190 Golph3-202ENSMUST00000226517 2359 ntBASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps9d1Q8C190 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Iqck-206ENSMUST00000208658 2891 ntBASIC18.77■□□□□ 0.6
Vps9d1Q8C190 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Vps9d1Q8C190 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps9d1Q8C190 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Gm15820-201ENSMUST00000201566 728 ntBASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.76■□□□□ 0.59
Vps9d1Q8C190 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps9d1Q8C190 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms