Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp43Q8BUM9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp43Q8BUM9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp43Q8BUM9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp43Q8BUM9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp43Q8BUM9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Usp43Q8BUM9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp43Q8BUM9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp43Q8BUM9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp43Q8BUM9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.5■□□□□ 0.87
Usp43Q8BUM9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp43Q8BUM9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.5■□□□□ 0.87
Usp43Q8BUM9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp43Q8BUM9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.5■□□□□ 0.87
Usp43Q8BUM9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp43Q8BUM9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp43Q8BUM9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp43Q8BUM9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp43Q8BUM9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp43Q8BUM9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.48■□□□□ 0.87
Usp43Q8BUM9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.48■□□□□ 0.87
Usp43Q8BUM9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp43Q8BUM9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp43Q8BUM9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp43Q8BUM9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Usp43Q8BUM9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms