Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr7Q8BU04 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr7Q8BU04 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr7Q8BU04 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubr7Q8BU04 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubr7Q8BU04 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr7Q8BU04 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr7Q8BU04 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ubr7Q8BU04 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Gm43173-201ENSMUST00000202246 593 ntBASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr7Q8BU04 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr7Q8BU04 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Ubr7Q8BU04 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ubr7Q8BU04 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr7Q8BU04 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr7Q8BU04 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr7Q8BU04 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.49■□□□□ 0.87
Ubr7Q8BU04 Spcs1-204ENSMUST00000226782 949 ntBASIC20.49■□□□□ 0.87
Ubr7Q8BU04 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr7Q8BU04 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr7Q8BU04 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr7Q8BU04 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Gm8493-201ENSMUST00000196881 489 ntBASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr7Q8BU04 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Mir6236-201ENSMUST00000184437 123 ntBASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr7Q8BU04 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ubr7Q8BU04 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms