Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk5rap1Q8BTW8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm43017-201ENSMUST00000198296 752 ntBASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cdk5rap1Q8BTW8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cdk5rap1Q8BTW8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm12251-201ENSMUST00000117893 792 ntBASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Spcs1-204ENSMUST00000226782 949 ntBASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk5rap1Q8BTW8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk5rap1Q8BTW8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cdk5rap1Q8BTW8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm43173-201ENSMUST00000202246 593 ntBASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk5rap1Q8BTW8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdk5rap1Q8BTW8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdk5rap1Q8BTW8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdk5rap1Q8BTW8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms