Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.61■□□□□ 0.89
Suds3Q8BR65 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Suds3Q8BR65 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.6■□□□□ 0.89
Suds3Q8BR65 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Suds3Q8BR65 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Suds3Q8BR65 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Suds3Q8BR65 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.58■□□□□ 0.89
Suds3Q8BR65 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Suds3Q8BR65 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Suds3Q8BR65 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Suds3Q8BR65 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Suds3Q8BR65 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Suds3Q8BR65 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Suds3Q8BR65 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Suds3Q8BR65 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Suds3Q8BR65 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
Suds3Q8BR65 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.57■□□□□ 0.88
Suds3Q8BR65 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.57■□□□□ 0.88
Suds3Q8BR65 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Suds3Q8BR65 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Suds3Q8BR65 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Suds3Q8BR65 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.56■□□□□ 0.88
Suds3Q8BR65 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.56■□□□□ 0.88
Suds3Q8BR65 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Suds3Q8BR65 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Suds3Q8BR65 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Suds3Q8BR65 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Suds3Q8BR65 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Gm22238-201ENSMUST00000175222 88 ntBASIC20.55■□□□□ 0.88
Suds3Q8BR65 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Suds3Q8BR65 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Suds3Q8BR65 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.54■□□□□ 0.88
Suds3Q8BR65 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Suds3Q8BR65 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
Suds3Q8BR65 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Suds3Q8BR65 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Suds3Q8BR65 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Suds3Q8BR65 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Suds3Q8BR65 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Suds3Q8BR65 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Suds3Q8BR65 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Suds3Q8BR65 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Suds3Q8BR65 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Suds3Q8BR65 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Suds3Q8BR65 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Suds3Q8BR65 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Suds3Q8BR65 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Suds3Q8BR65 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Suds3Q8BR65 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Suds3Q8BR65 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Suds3Q8BR65 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Suds3Q8BR65 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Suds3Q8BR65 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Suds3Q8BR65 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Suds3Q8BR65 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Suds3Q8BR65 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Suds3Q8BR65 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Suds3Q8BR65 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Suds3Q8BR65 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Suds3Q8BR65 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms