Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sfr1Q8BP27 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sfr1Q8BP27 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sfr1Q8BP27 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sfr1Q8BP27 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sfr1Q8BP27 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sfr1Q8BP27 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sfr1Q8BP27 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sfr1Q8BP27 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sfr1Q8BP27 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sfr1Q8BP27 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sfr1Q8BP27 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.45■□□□□ 0.86
Sfr1Q8BP27 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.45■□□□□ 0.86
Sfr1Q8BP27 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.45■□□□□ 0.86
Sfr1Q8BP27 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sfr1Q8BP27 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Gm43530-201ENSMUST00000195920 274 ntBASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sfr1Q8BP27 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.42■□□□□ 0.86
Sfr1Q8BP27 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.42■□□□□ 0.86
Sfr1Q8BP27 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sfr1Q8BP27 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sfr1Q8BP27 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sfr1Q8BP27 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.4■□□□□ 0.86
Sfr1Q8BP27 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sfr1Q8BP27 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sfr1Q8BP27 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
Sfr1Q8BP27 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sfr1Q8BP27 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sfr1Q8BP27 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sfr1Q8BP27 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sfr1Q8BP27 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Sfr1Q8BP27 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sfr1Q8BP27 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sfr1Q8BP27 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms