Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne4Q8BLR2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cpne4Q8BLR2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne4Q8BLR2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne4Q8BLR2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne4Q8BLR2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cpne4Q8BLR2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne4Q8BLR2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne4Q8BLR2 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.08■□□□□ 0.48
Cpne4Q8BLR2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne4Q8BLR2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne4Q8BLR2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne4Q8BLR2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.05■□□□□ 0.48
Cpne4Q8BLR2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Gm21956-201ENSMUST00000179946 522 ntBASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cpne4Q8BLR2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpne4Q8BLR2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpne4Q8BLR2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpne4Q8BLR2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpne4Q8BLR2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpne4Q8BLR2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.02■□□□□ 0.47
Cpne4Q8BLR2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpne4Q8BLR2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne4Q8BLR2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cpne4Q8BLR2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne4Q8BLR2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne4Q8BLR2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
Cpne4Q8BLR2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne4Q8BLR2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne4Q8BLR2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Cpne4Q8BLR2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne4Q8BLR2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne4Q8BLR2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.99■□□□□ 0.47
Cpne4Q8BLR2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne4Q8BLR2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne4Q8BLR2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms