Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdhr3Q8BL00 Iqck-206ENSMUST00000208658 2891 ntBASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Gm45444-201ENSMUST00000211394 898 ntBASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr3Q8BL00 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cdhr3Q8BL00 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr3Q8BL00 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr3Q8BL00 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr3Q8BL00 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr3Q8BL00 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr3Q8BL00 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdhr3Q8BL00 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdhr3Q8BL00 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr3Q8BL00 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr3Q8BL00 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr3Q8BL00 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr3Q8BL00 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr3Q8BL00 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr3Q8BL00 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr3Q8BL00 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.6■□□□□ 0.41
Cdhr3Q8BL00 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdhr3Q8BL00 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cdhr3Q8BL00 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdhr3Q8BL00 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdhr3Q8BL00 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdhr3Q8BL00 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdhr3Q8BL00 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdhr3Q8BL00 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdhr3Q8BL00 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdhr3Q8BL00 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdhr3Q8BL00 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms