Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tdp1Q8BJ37 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Gm42569-201ENSMUST00000200539 472 ntBASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
Tdp1Q8BJ37 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
Tdp1Q8BJ37 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Tdp1Q8BJ37 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
Tdp1Q8BJ37 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Tdp1Q8BJ37 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tdp1Q8BJ37 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.51■■□□□ 1.19
Tdp1Q8BJ37 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Tdp1Q8BJ37 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tdp1Q8BJ37 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tdp1Q8BJ37 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Tdp1Q8BJ37 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Gm27405-201ENSMUST00000184201 112 ntBASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tdp1Q8BJ37 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tdp1Q8BJ37 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tdp1Q8BJ37 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.48■■□□□ 1.19
Tdp1Q8BJ37 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tdp1Q8BJ37 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tdp1Q8BJ37 Gm10849-201ENSMUST00000100397 618 ntBASIC22.47■■□□□ 1.19
Tdp1Q8BJ37 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tdp1Q8BJ37 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tdp1Q8BJ37 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tdp1Q8BJ37 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tdp1Q8BJ37 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tdp1Q8BJ37 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tdp1Q8BJ37 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tdp1Q8BJ37 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tdp1Q8BJ37 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tdp1Q8BJ37 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Tdp1Q8BJ37 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tdp1Q8BJ37 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Tdp1Q8BJ37 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tdp1Q8BJ37 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tdp1Q8BJ37 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Tdp1Q8BJ37 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tdp1Q8BJ37 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tdp1Q8BJ37 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tdp1Q8BJ37 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Tdp1Q8BJ37 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tdp1Q8BJ37 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.44■■□□□ 1.18
Tdp1Q8BJ37 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
Tdp1Q8BJ37 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tdp1Q8BJ37 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tdp1Q8BJ37 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tdp1Q8BJ37 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tdp1Q8BJ37 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tdp1Q8BJ37 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tdp1Q8BJ37 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tdp1Q8BJ37 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tdp1Q8BJ37 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Tdp1Q8BJ37 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tdp1Q8BJ37 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tdp1Q8BJ37 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tdp1Q8BJ37 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tdp1Q8BJ37 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.4■■□□□ 1.18
Tdp1Q8BJ37 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tdp1Q8BJ37 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Tdp1Q8BJ37 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Gm11421-201ENSMUST00000122124 294 ntBASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tdp1Q8BJ37 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms