Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim65Q8BFW4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.7■■□□□ 1.06
Trim65Q8BFW4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim65Q8BFW4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim65Q8BFW4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim65Q8BFW4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim65Q8BFW4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim65Q8BFW4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim65Q8BFW4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim65Q8BFW4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim65Q8BFW4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim65Q8BFW4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim65Q8BFW4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim65Q8BFW4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim65Q8BFW4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Trim65Q8BFW4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim65Q8BFW4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
Trim65Q8BFW4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim65Q8BFW4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim65Q8BFW4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.64■■□□□ 1.05
Trim65Q8BFW4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim65Q8BFW4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim65Q8BFW4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim65Q8BFW4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim65Q8BFW4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim65Q8BFW4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim65Q8BFW4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim65Q8BFW4 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.62■■□□□ 1.05
Trim65Q8BFW4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim65Q8BFW4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim65Q8BFW4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim65Q8BFW4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim65Q8BFW4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.61■■□□□ 1.05
Trim65Q8BFW4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim65Q8BFW4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim65Q8BFW4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim65Q8BFW4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim65Q8BFW4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim65Q8BFW4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Trim65Q8BFW4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim65Q8BFW4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms