Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atpaf1Q811I0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atpaf1Q811I0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atpaf1Q811I0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atpaf1Q811I0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Gm8503-201ENSMUST00000118131 455 ntBASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atpaf1Q811I0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atpaf1Q811I0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atpaf1Q811I0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Atpaf1Q811I0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Atpaf1Q811I0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Golph3-205ENSMUST00000228671 2842 ntBASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atpaf1Q811I0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atpaf1Q811I0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Gm45364-201ENSMUST00000210883 159 ntBASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atpaf1Q811I0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Atpaf1Q811I0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atpaf1Q811I0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms