Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim50Q810I2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim50Q810I2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim50Q810I2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim50Q810I2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.68■□□□□ 0.74
Trim50Q810I2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim50Q810I2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim50Q810I2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim50Q810I2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim50Q810I2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim50Q810I2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim50Q810I2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim50Q810I2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim50Q810I2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Trim50Q810I2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim50Q810I2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim50Q810I2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim50Q810I2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim50Q810I2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim50Q810I2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim50Q810I2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim50Q810I2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim50Q810I2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim50Q810I2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim50Q810I2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.66■□□□□ 0.74
Trim50Q810I2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Trim50Q810I2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim50Q810I2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim50Q810I2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim50Q810I2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim50Q810I2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim50Q810I2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim50Q810I2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim50Q810I2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim50Q810I2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim50Q810I2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim50Q810I2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim50Q810I2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.64■□□□□ 0.73
Trim50Q810I2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim50Q810I2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim50Q810I2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Trim50Q810I2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim50Q810I2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim50Q810I2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim50Q810I2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.63■□□□□ 0.73
Trim50Q810I2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim50Q810I2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Trim50Q810I2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
Trim50Q810I2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim50Q810I2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim50Q810I2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim50Q810I2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim50Q810I2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Trim50Q810I2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
Trim50Q810I2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim50Q810I2 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.61■□□□□ 0.73
Trim50Q810I2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim50Q810I2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim50Q810I2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim50Q810I2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim50Q810I2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim50Q810I2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim50Q810I2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Trim50Q810I2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.6■□□□□ 0.73
Trim50Q810I2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim50Q810I2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim50Q810I2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim50Q810I2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim50Q810I2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim50Q810I2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim50Q810I2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms