Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ttc28Q80XJ3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ttc28Q80XJ3 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.21■□□□□ 0.34
Ttc28Q80XJ3 Nespas-201ENSMUST00000143738 1083 ntBASIC17.21■□□□□ 0.34
Ttc28Q80XJ3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.21■□□□□ 0.34
Ttc28Q80XJ3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ttc28Q80XJ3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ttc28Q80XJ3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Mir7071-201ENSMUST00000184847 69 ntBASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ttc28Q80XJ3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ttc28Q80XJ3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ttc28Q80XJ3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 Gm27801-201ENSMUST00000184174 223 ntBASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ttc28Q80XJ3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ttc28Q80XJ3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.14■□□□□ 0.34
Ttc28Q80XJ3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ttc28Q80XJ3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Reep4-203ENSMUST00000226563 1444 ntBASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc28Q80XJ3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.13■□□□□ 0.33
Ttc28Q80XJ3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ttc28Q80XJ3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc28Q80XJ3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ttc28Q80XJ3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Ttc28Q80XJ3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc28Q80XJ3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ttc28Q80XJ3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms