Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.31■□□□□ 0.68
Vrk1Q80X41 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk1Q80X41 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.3■□□□□ 0.68
Vrk1Q80X41 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vrk1Q80X41 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Vrk1Q80X41 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vrk1Q80X41 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vrk1Q80X41 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vrk1Q80X41 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vrk1Q80X41 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vrk1Q80X41 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk1Q80X41 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.29■□□□□ 0.68
Vrk1Q80X41 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk1Q80X41 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.29■□□□□ 0.68
Vrk1Q80X41 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk1Q80X41 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.29■□□□□ 0.68
Vrk1Q80X41 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vrk1Q80X41 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Vrk1Q80X41 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Vrk1Q80X41 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vrk1Q80X41 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vrk1Q80X41 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vrk1Q80X41 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.27■□□□□ 0.68
Vrk1Q80X41 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Vrk1Q80X41 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.27■□□□□ 0.68
Vrk1Q80X41 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vrk1Q80X41 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vrk1Q80X41 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vrk1Q80X41 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Vrk1Q80X41 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk1Q80X41 Gm43060-201ENSMUST00000200621 289 ntBASIC19.26■□□□□ 0.67
Vrk1Q80X41 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk1Q80X41 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.26■□□□□ 0.67
Vrk1Q80X41 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.26■□□□□ 0.67
Vrk1Q80X41 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk1Q80X41 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk1Q80X41 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk1Q80X41 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk1Q80X41 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk1Q80X41 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk1Q80X41 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vrk1Q80X41 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vrk1Q80X41 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vrk1Q80X41 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vrk1Q80X41 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vrk1Q80X41 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vrk1Q80X41 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vrk1Q80X41 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.24■□□□□ 0.67
Vrk1Q80X41 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.23■□□□□ 0.67
Vrk1Q80X41 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vrk1Q80X41 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Vrk1Q80X41 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vrk1Q80X41 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Vrk1Q80X41 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vrk1Q80X41 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vrk1Q80X41 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms