Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Gm10252-201ENSMUST00000209541 832 ntBASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc18Q80WC3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Tnrc18Q80WC3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Reep4-203ENSMUST00000226563 1444 ntBASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc18Q80WC3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc18Q80WC3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc18Q80WC3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc18Q80WC3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc18Q80WC3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnrc18Q80WC3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnrc18Q80WC3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Gm13234-201ENSMUST00000120010 747 ntBASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Gm12441-201ENSMUST00000121806 588 ntBASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Gm4968-201ENSMUST00000071458 858 ntBASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc18Q80WC3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc18Q80WC3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc18Q80WC3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc18Q80WC3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc18Q80WC3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.52■□□□□ 0.88
Tnrc18Q80WC3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnrc18Q80WC3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.52■□□□□ 0.87
Tnrc18Q80WC3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms