Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shc4Q6S5L9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Shc4Q6S5L9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shc4Q6S5L9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shc4Q6S5L9 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.84■□□□□ 0.61
Shc4Q6S5L9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Shc4Q6S5L9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.84■□□□□ 0.61
Shc4Q6S5L9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shc4Q6S5L9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shc4Q6S5L9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shc4Q6S5L9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shc4Q6S5L9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.83■□□□□ 0.61
Shc4Q6S5L9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shc4Q6S5L9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shc4Q6S5L9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.83■□□□□ 0.6
Shc4Q6S5L9 Mir7075-201ENSMUST00000184187 82 ntBASIC18.83■□□□□ 0.6
Shc4Q6S5L9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.83■□□□□ 0.6
Shc4Q6S5L9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shc4Q6S5L9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shc4Q6S5L9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shc4Q6S5L9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shc4Q6S5L9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shc4Q6S5L9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shc4Q6S5L9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shc4Q6S5L9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shc4Q6S5L9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shc4Q6S5L9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.82■□□□□ 0.6
Shc4Q6S5L9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Shc4Q6S5L9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shc4Q6S5L9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc4Q6S5L9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.78■□□□□ 0.6
Shc4Q6S5L9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms