Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rif1Q6PR54 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.24■□□□□ 0.35
Rif1Q6PR54 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rif1Q6PR54 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.24■□□□□ 0.35
Rif1Q6PR54 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rif1Q6PR54 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.23■□□□□ 0.35
Rif1Q6PR54 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.23■□□□□ 0.35
Rif1Q6PR54 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rif1Q6PR54 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rif1Q6PR54 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rif1Q6PR54 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rif1Q6PR54 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rif1Q6PR54 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.22■□□□□ 0.35
Rif1Q6PR54 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rif1Q6PR54 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rif1Q6PR54 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Gm11421-201ENSMUST00000122124 294 ntBASIC17.21■□□□□ 0.35
Rif1Q6PR54 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Gm6365-201ENSMUST00000054711 744 ntBASIC17.21■□□□□ 0.35
Rif1Q6PR54 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rif1Q6PR54 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rif1Q6PR54 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rif1Q6PR54 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rif1Q6PR54 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rif1Q6PR54 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Rif1Q6PR54 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.2■□□□□ 0.34
Rif1Q6PR54 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rif1Q6PR54 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rif1Q6PR54 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rif1Q6PR54 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.19■□□□□ 0.34
Rif1Q6PR54 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rif1Q6PR54 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rif1Q6PR54 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rif1Q6PR54 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.18■□□□□ 0.34
Rif1Q6PR54 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rif1Q6PR54 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rif1Q6PR54 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.17■□□□□ 0.34
Rif1Q6PR54 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.17■□□□□ 0.34
Rif1Q6PR54 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rif1Q6PR54 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rif1Q6PR54 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rif1Q6PR54 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rif1Q6PR54 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rif1Q6PR54 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rif1Q6PR54 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rif1Q6PR54 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rif1Q6PR54 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rif1Q6PR54 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.16■□□□□ 0.34
Rif1Q6PR54 Gm7367-201ENSMUST00000057611 492 ntBASIC17.16■□□□□ 0.34
Rif1Q6PR54 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.15■□□□□ 0.34
Rif1Q6PR54 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Gm43530-201ENSMUST00000195920 274 ntBASIC17.15■□□□□ 0.34
Rif1Q6PR54 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rif1Q6PR54 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rif1Q6PR54 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rif1Q6PR54 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms