Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf4Q6PFF0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf4Q6PFF0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scaf4Q6PFF0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf4Q6PFF0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf4Q6PFF0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Scaf4Q6PFF0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf4Q6PFF0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf4Q6PFF0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Gm10420-201ENSMUST00000121713 882 ntBASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scaf4Q6PFF0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.95■□□□□ 0.79
Scaf4Q6PFF0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf4Q6PFF0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Scaf4Q6PFF0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf4Q6PFF0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Gm12366-201ENSMUST00000121722 873 ntBASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Gm5786-201ENSMUST00000085368 882 ntBASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf4Q6PFF0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf4Q6PFF0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scaf4Q6PFF0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Scaf4Q6PFF0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf4Q6PFF0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf4Q6PFF0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf4Q6PFF0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf4Q6PFF0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms