Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Gm16437-201ENSMUST00000025669 507 ntBASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf220Q6PDX6 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.02■□□□□ 0.63
Rnf220Q6PDX6 Grk6-206ENSMUST00000224995 2971 ntBASIC19.02■□□□□ 0.63
Rnf220Q6PDX6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf220Q6PDX6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Gm11687-201ENSMUST00000118911 886 ntBASIC19■□□□□ 0.63
Rnf220Q6PDX6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19■□□□□ 0.63
Rnf220Q6PDX6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf220Q6PDX6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf220Q6PDX6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf220Q6PDX6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf220Q6PDX6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf220Q6PDX6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf220Q6PDX6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf220Q6PDX6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf220Q6PDX6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf220Q6PDX6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.95■□□□□ 0.62
Rnf220Q6PDX6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Rnf220Q6PDX6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf220Q6PDX6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms