Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShbQ6PD21 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShbQ6PD21 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShbQ6PD21 Gm7514-201ENSMUST00000209475 934 ntBASIC22.4■■□□□ 1.18
ShbQ6PD21 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShbQ6PD21 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShbQ6PD21 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ShbQ6PD21 Gm12527-201ENSMUST00000117967 564 ntBASIC22.39■■□□□ 1.17
ShbQ6PD21 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
ShbQ6PD21 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ShbQ6PD21 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ShbQ6PD21 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.39■■□□□ 1.17
ShbQ6PD21 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ShbQ6PD21 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ShbQ6PD21 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ShbQ6PD21 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
ShbQ6PD21 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.39■■□□□ 1.17
ShbQ6PD21 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShbQ6PD21 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.38■■□□□ 1.17
ShbQ6PD21 Mir5133-201ENSMUST00000174955 77 ntBASIC22.38■■□□□ 1.17
ShbQ6PD21 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.38■■□□□ 1.17
ShbQ6PD21 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ShbQ6PD21 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ShbQ6PD21 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.37■■□□□ 1.17
ShbQ6PD21 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
ShbQ6PD21 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
ShbQ6PD21 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShbQ6PD21 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShbQ6PD21 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ShbQ6PD21 Gm22325-201ENSMUST00000158904 308 ntBASIC22.36■■□□□ 1.17
ShbQ6PD21 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.36■■□□□ 1.17
ShbQ6PD21 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ShbQ6PD21 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ShbQ6PD21 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.36■■□□□ 1.17
ShbQ6PD21 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
ShbQ6PD21 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.35■■□□□ 1.17
ShbQ6PD21 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
ShbQ6PD21 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ShbQ6PD21 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ShbQ6PD21 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ShbQ6PD21 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ShbQ6PD21 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
ShbQ6PD21 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.34■■□□□ 1.17
ShbQ6PD21 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShbQ6PD21 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShbQ6PD21 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.33■■□□□ 1.17
ShbQ6PD21 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShbQ6PD21 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ShbQ6PD21 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
ShbQ6PD21 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
ShbQ6PD21 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
ShbQ6PD21 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ShbQ6PD21 Gm8520-201ENSMUST00000186517 868 ntBASIC22.32■■□□□ 1.16
ShbQ6PD21 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShbQ6PD21 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ShbQ6PD21 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
ShbQ6PD21 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
ShbQ6PD21 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShbQ6PD21 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShbQ6PD21 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShbQ6PD21 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ShbQ6PD21 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.3■■□□□ 1.16
ShbQ6PD21 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ShbQ6PD21 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.3■■□□□ 1.16
ShbQ6PD21 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
ShbQ6PD21 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShbQ6PD21 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ShbQ6PD21 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
ShbQ6PD21 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShbQ6PD21 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ShbQ6PD21 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShbQ6PD21 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShbQ6PD21 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
ShbQ6PD21 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShbQ6PD21 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShbQ6PD21 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShbQ6PD21 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ShbQ6PD21 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.28■■□□□ 1.16
ShbQ6PD21 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ShbQ6PD21 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ShbQ6PD21 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ShbQ6PD21 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.28■■□□□ 1.16
ShbQ6PD21 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ShbQ6PD21 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms