Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.5■□□□□ 0.71
AtmQ62388 Gm20760-201ENSMUST00000179197 648 ntBASIC19.5■□□□□ 0.71
AtmQ62388 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.5■□□□□ 0.71
AtmQ62388 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.5■□□□□ 0.71
AtmQ62388 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
AtmQ62388 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
AtmQ62388 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AtmQ62388 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AtmQ62388 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AtmQ62388 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AtmQ62388 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AtmQ62388 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AtmQ62388 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
AtmQ62388 Gm12441-201ENSMUST00000121806 588 ntBASIC19.48■□□□□ 0.71
AtmQ62388 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AtmQ62388 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AtmQ62388 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AtmQ62388 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.48■□□□□ 0.71
AtmQ62388 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AtmQ62388 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
AtmQ62388 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AtmQ62388 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AtmQ62388 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AtmQ62388 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AtmQ62388 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
AtmQ62388 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
AtmQ62388 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AtmQ62388 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
AtmQ62388 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AtmQ62388 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AtmQ62388 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AtmQ62388 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AtmQ62388 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AtmQ62388 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.45■□□□□ 0.7
AtmQ62388 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.45■□□□□ 0.7
AtmQ62388 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
AtmQ62388 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
AtmQ62388 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Gm4968-201ENSMUST00000071458 858 ntBASIC19.45■□□□□ 0.7
AtmQ62388 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
AtmQ62388 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AtmQ62388 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AtmQ62388 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AtmQ62388 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
AtmQ62388 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
AtmQ62388 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AtmQ62388 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AtmQ62388 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.44■□□□□ 0.7
AtmQ62388 Gm13148-201ENSMUST00000118892 745 ntBASIC19.43■□□□□ 0.7
AtmQ62388 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AtmQ62388 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
AtmQ62388 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AtmQ62388 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AtmQ62388 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
AtmQ62388 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
AtmQ62388 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AtmQ62388 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
AtmQ62388 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AtmQ62388 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.43■□□□□ 0.7
AtmQ62388 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.43■□□□□ 0.7
AtmQ62388 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
AtmQ62388 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AtmQ62388 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AtmQ62388 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AtmQ62388 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AtmQ62388 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
AtmQ62388 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
AtmQ62388 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AtmQ62388 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.41■□□□□ 0.7
AtmQ62388 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AtmQ62388 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
AtmQ62388 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.41■□□□□ 0.7
AtmQ62388 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AtmQ62388 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AtmQ62388 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.4■□□□□ 0.7
AtmQ62388 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.4■□□□□ 0.7
AtmQ62388 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.4■□□□□ 0.7
AtmQ62388 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.4■□□□□ 0.7
AtmQ62388 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms