Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Notch3Q61982 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Notch3Q61982 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.4■□□□□ 0.06
Notch3Q61982 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.4■□□□□ 0.06
Notch3Q61982 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.4■□□□□ 0.06
Notch3Q61982 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch3Q61982 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.39■□□□□ 0.05
Notch3Q61982 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.39■□□□□ 0.05
Notch3Q61982 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch3Q61982 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch3Q61982 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch3Q61982 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch3Q61982 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch3Q61982 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.39■□□□□ 0.05
Notch3Q61982 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch3Q61982 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Notch3Q61982 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Notch3Q61982 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Notch3Q61982 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch3Q61982 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Notch3Q61982 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Notch3Q61982 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Notch3Q61982 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch3Q61982 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Notch3Q61982 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch3Q61982 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch3Q61982 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch3Q61982 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Notch3Q61982 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Notch3Q61982 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Notch3Q61982 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch3Q61982 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.37■□□□□ 0.05
Notch3Q61982 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Notch3Q61982 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Notch3Q61982 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.37■□□□□ 0.05
Notch3Q61982 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Notch3Q61982 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Notch3Q61982 Gm10493-201ENSMUST00000097270 612 ntBASIC15.37■□□□□ 0.05
Notch3Q61982 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Notch3Q61982 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Notch3Q61982 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Notch3Q61982 Gm7291-201ENSMUST00000199147 382 ntBASIC15.36■□□□□ 0.05
Notch3Q61982 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Notch3Q61982 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Notch3Q61982 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Notch3Q61982 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.35■□□□□ 0.05
Notch3Q61982 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Notch3Q61982 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Notch3Q61982 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.35■□□□□ 0.05
Notch3Q61982 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Notch3Q61982 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.35■□□□□ 0.05
Notch3Q61982 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Notch3Q61982 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Notch3Q61982 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Notch3Q61982 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Notch3Q61982 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Notch3Q61982 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Notch3Q61982 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Gm7143-201ENSMUST00000222811 859 ntBASIC15.34■□□□□ 0.05
Notch3Q61982 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.34■□□□□ 0.05
Notch3Q61982 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Notch3Q61982 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.33■□□□□ 0.05
Notch3Q61982 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Notch3Q61982 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Notch3Q61982 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Notch3Q61982 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Notch3Q61982 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Notch3Q61982 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Notch3Q61982 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Notch3Q61982 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.33■□□□□ 0.04
Notch3Q61982 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.32■□□□□ 0.04
Notch3Q61982 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Notch3Q61982 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.32■□□□□ 0.04
Notch3Q61982 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Notch3Q61982 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Notch3Q61982 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Notch3Q61982 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Notch3Q61982 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Notch3Q61982 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Notch3Q61982 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Notch3Q61982 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.32■□□□□ 0.04
Notch3Q61982 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Notch3Q61982 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Notch3Q61982 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.32■□□□□ 0.04
Notch3Q61982 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms