Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sox17Q61473 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox17Q61473 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.97■□□□□ 0.63
Sox17Q61473 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox17Q61473 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sox17Q61473 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox17Q61473 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.97■□□□□ 0.63
Sox17Q61473 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox17Q61473 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.96■□□□□ 0.63
Sox17Q61473 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox17Q61473 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox17Q61473 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox17Q61473 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Sox17Q61473 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox17Q61473 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox17Q61473 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox17Q61473 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sox17Q61473 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox17Q61473 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Sox17Q61473 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox17Q61473 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.95■□□□□ 0.62
Sox17Q61473 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox17Q61473 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox17Q61473 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.95■□□□□ 0.62
Sox17Q61473 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox17Q61473 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox17Q61473 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.94■□□□□ 0.62
Sox17Q61473 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox17Q61473 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox17Q61473 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sox17Q61473 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.94■□□□□ 0.62
Sox17Q61473 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox17Q61473 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox17Q61473 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox17Q61473 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox17Q61473 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox17Q61473 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Sox17Q61473 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox17Q61473 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox17Q61473 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox17Q61473 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox17Q61473 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sox17Q61473 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox17Q61473 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox17Q61473 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox17Q61473 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox17Q61473 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.91■□□□□ 0.62
Sox17Q61473 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.91■□□□□ 0.62
Sox17Q61473 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox17Q61473 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox17Q61473 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox17Q61473 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sox17Q61473 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox17Q61473 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox17Q61473 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox17Q61473 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Sox17Q61473 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.9■□□□□ 0.62
Sox17Q61473 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.9■□□□□ 0.62
Sox17Q61473 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox17Q61473 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox17Q61473 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
Sox17Q61473 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sox17Q61473 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox17Q61473 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox17Q61473 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox17Q61473 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox17Q61473 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Sox17Q61473 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox17Q61473 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.88■□□□□ 0.61
Sox17Q61473 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox17Q61473 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sox17Q61473 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox17Q61473 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox17Q61473 Gm14523-201ENSMUST00000117260 558 ntBASIC18.87■□□□□ 0.61
Sox17Q61473 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox17Q61473 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox17Q61473 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox17Q61473 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms