Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ptch1Q61115 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
Ptch1Q61115 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ptch1Q61115 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC29.92■■■□□ 2.38
Ptch1Q61115 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ptch1Q61115 Gm10252-201ENSMUST00000209541 832 ntBASIC29.92■■■□□ 2.38
Ptch1Q61115 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ptch1Q61115 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Ptch1Q61115 AC153890.1-201ENSMUST00000220021 2469 ntBASIC29.91■■■□□ 2.38
Ptch1Q61115 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Ptch1Q61115 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
Ptch1Q61115 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ptch1Q61115 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC29.91■■■□□ 2.38
Ptch1Q61115 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC29.91■■■□□ 2.38
Ptch1Q61115 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC29.91■■■□□ 2.38
Ptch1Q61115 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ptch1Q61115 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC29.91■■■□□ 2.38
Ptch1Q61115 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ptch1Q61115 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ptch1Q61115 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ptch1Q61115 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ptch1Q61115 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
Ptch1Q61115 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Ptch1Q61115 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC29.89■■■□□ 2.38
Ptch1Q61115 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC29.89■■■□□ 2.38
Ptch1Q61115 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Ptch1Q61115 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Ptch1Q61115 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.37
Ptch1Q61115 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
Ptch1Q61115 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC29.89■■■□□ 2.37
Ptch1Q61115 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ptch1Q61115 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Ptch1Q61115 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC29.88■■■□□ 2.37
Ptch1Q61115 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
Ptch1Q61115 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ptch1Q61115 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC29.88■■■□□ 2.37
Ptch1Q61115 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ptch1Q61115 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ptch1Q61115 Gm4968-201ENSMUST00000071458 858 ntBASIC29.88■■■□□ 2.37
Ptch1Q61115 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ptch1Q61115 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ptch1Q61115 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
Ptch1Q61115 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC29.87■■■□□ 2.37
Ptch1Q61115 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
Ptch1Q61115 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Ptch1Q61115 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Ptch1Q61115 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Ptch1Q61115 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC29.86■■■□□ 2.37
Ptch1Q61115 AC137127.1-201ENSMUST00000213466 1078 ntBASIC29.86■■■□□ 2.37
Ptch1Q61115 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ptch1Q61115 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ptch1Q61115 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ptch1Q61115 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ptch1Q61115 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ptch1Q61115 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ptch1Q61115 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ptch1Q61115 Gm12527-201ENSMUST00000117967 564 ntBASIC29.84■■■□□ 2.37
Ptch1Q61115 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
Ptch1Q61115 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ptch1Q61115 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Ptch1Q61115 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Ptch1Q61115 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC29.83■■■□□ 2.37
Ptch1Q61115 Gm42555-201ENSMUST00000199304 1039 ntBASIC29.83■■■□□ 2.37
Ptch1Q61115 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Ptch1Q61115 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Ptch1Q61115 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Ptch1Q61115 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ptch1Q61115 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ptch1Q61115 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ptch1Q61115 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Ptch1Q61115 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC29.82■■■□□ 2.36
Ptch1Q61115 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ptch1Q61115 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
Ptch1Q61115 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Ptch1Q61115 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ptch1Q61115 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC29.81■■■□□ 2.36
Ptch1Q61115 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ptch1Q61115 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ptch1Q61115 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ptch1Q61115 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ptch1Q61115 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ptch1Q61115 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC29.8■■■□□ 2.36
Ptch1Q61115 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Ptch1Q61115 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Ptch1Q61115 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Ptch1Q61115 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC29.79■■■□□ 2.36
Ptch1Q61115 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Ptch1Q61115 Gm7514-201ENSMUST00000209475 934 ntBASIC29.79■■■□□ 2.36
Ptch1Q61115 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Ptch1Q61115 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ptch1Q61115 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ptch1Q61115 Mir5133-201ENSMUST00000174955 77 ntBASIC29.78■■■□□ 2.36
Ptch1Q61115 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Ptch1Q61115 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Ptch1Q61115 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
Ptch1Q61115 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC29.77■■■□□ 2.36
Ptch1Q61115 Gm22240-201ENSMUST00000175225 82 ntBASIC29.77■■■□□ 2.36
Ptch1Q61115 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
Ptch1Q61115 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Ptch1Q61115 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms