Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Sim1Q61045 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sim1Q61045 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sim1Q61045 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sim1Q61045 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sim1Q61045 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sim1Q61045 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Sim1Q61045 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sim1Q61045 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sim1Q61045 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sim1Q61045 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.04■□□□□ 0.8
Sim1Q61045 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Sim1Q61045 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sim1Q61045 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sim1Q61045 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.04■□□□□ 0.8
Sim1Q61045 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sim1Q61045 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sim1Q61045 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sim1Q61045 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Sim1Q61045 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Sim1Q61045 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.03■□□□□ 0.8
Sim1Q61045 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sim1Q61045 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sim1Q61045 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sim1Q61045 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.03■□□□□ 0.8
Sim1Q61045 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sim1Q61045 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sim1Q61045 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.02■□□□□ 0.8
Sim1Q61045 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sim1Q61045 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.02■□□□□ 0.8
Sim1Q61045 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.02■□□□□ 0.8
Sim1Q61045 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sim1Q61045 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sim1Q61045 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sim1Q61045 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sim1Q61045 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Sim1Q61045 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.01■□□□□ 0.79
Sim1Q61045 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sim1Q61045 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sim1Q61045 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Sim1Q61045 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sim1Q61045 Gm5913-201ENSMUST00000119397 1399 ntBASIC20■□□□□ 0.79
Sim1Q61045 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Sim1Q61045 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20■□□□□ 0.79
Sim1Q61045 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20■□□□□ 0.79
Sim1Q61045 Wdr70-203ENSMUST00000227371 1130 ntBASIC20■□□□□ 0.79
Sim1Q61045 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sim1Q61045 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sim1Q61045 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sim1Q61045 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
Sim1Q61045 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sim1Q61045 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Sim1Q61045 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Sim1Q61045 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.99■□□□□ 0.79
Sim1Q61045 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sim1Q61045 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Sim1Q61045 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sim1Q61045 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sim1Q61045 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sim1Q61045 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.98■□□□□ 0.79
Sim1Q61045 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.98■□□□□ 0.79
Sim1Q61045 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sim1Q61045 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Sim1Q61045 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sim1Q61045 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sim1Q61045 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
Sim1Q61045 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sim1Q61045 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sim1Q61045 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sim1Q61045 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sim1Q61045 Gm42569-201ENSMUST00000200539 472 ntBASIC19.97■□□□□ 0.79
Sim1Q61045 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sim1Q61045 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.97■□□□□ 0.79
Sim1Q61045 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sim1Q61045 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Sim1Q61045 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sim1Q61045 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sim1Q61045 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sim1Q61045 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sim1Q61045 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms