Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn11Q60771 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn11Q60771 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21■□□□□ 0.95
Cldn11Q60771 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Cldn11Q60771 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cldn11Q60771 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cldn11Q60771 Gm6139-201ENSMUST00000079261 882 ntBASIC21■□□□□ 0.95
Cldn11Q60771 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn11Q60771 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn11Q60771 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cldn11Q60771 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn11Q60771 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cldn11Q60771 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cldn11Q60771 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cldn11Q60771 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn11Q60771 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn11Q60771 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn11Q60771 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn11Q60771 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn11Q60771 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn11Q60771 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn11Q60771 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn11Q60771 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn11Q60771 Mir6236-201ENSMUST00000184437 123 ntBASIC20.98■□□□□ 0.95
Cldn11Q60771 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn11Q60771 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn11Q60771 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cldn11Q60771 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.98■□□□□ 0.95
Cldn11Q60771 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Cldn11Q60771 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn11Q60771 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn11Q60771 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn11Q60771 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.97■□□□□ 0.95
Cldn11Q60771 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn11Q60771 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn11Q60771 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cldn11Q60771 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.96■□□□□ 0.95
Cldn11Q60771 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.96■□□□□ 0.95
Cldn11Q60771 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cldn11Q60771 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn11Q60771 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.95■□□□□ 0.94
Cldn11Q60771 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn11Q60771 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn11Q60771 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.95■□□□□ 0.94
Cldn11Q60771 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn11Q60771 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.95■□□□□ 0.94
Cldn11Q60771 Serp2-204ENSMUST00000228055 705 ntBASIC20.95■□□□□ 0.94
Cldn11Q60771 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn11Q60771 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn11Q60771 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.94■□□□□ 0.94
Cldn11Q60771 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.94■□□□□ 0.94
Cldn11Q60771 Gm8493-201ENSMUST00000196881 489 ntBASIC20.94■□□□□ 0.94
Cldn11Q60771 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.94■□□□□ 0.94
Cldn11Q60771 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn11Q60771 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn11Q60771 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn11Q60771 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cldn11Q60771 Gm12251-201ENSMUST00000117893 792 ntBASIC20.92■□□□□ 0.94
Cldn11Q60771 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.92■□□□□ 0.94
Cldn11Q60771 Spcs1-204ENSMUST00000226782 949 ntBASIC20.92■□□□□ 0.94
Cldn11Q60771 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cldn11Q60771 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.92■□□□□ 0.94
Cldn11Q60771 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn11Q60771 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.91■□□□□ 0.94
Cldn11Q60771 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn11Q60771 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.91■□□□□ 0.94
Cldn11Q60771 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn11Q60771 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn11Q60771 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn11Q60771 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cldn11Q60771 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cldn11Q60771 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn11Q60771 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms