Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Xrcc1Q60596 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Xrcc1Q60596 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Xrcc1Q60596 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Xrcc1Q60596 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.32■□□□□ 0.68
Xrcc1Q60596 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.32■□□□□ 0.68
Xrcc1Q60596 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc1Q60596 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc1Q60596 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc1Q60596 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc1Q60596 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc1Q60596 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.31■□□□□ 0.68
Xrcc1Q60596 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc1Q60596 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
Xrcc1Q60596 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc1Q60596 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Xrcc1Q60596 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc1Q60596 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc1Q60596 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrcc1Q60596 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrcc1Q60596 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Xrcc1Q60596 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrcc1Q60596 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrcc1Q60596 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.29■□□□□ 0.68
Xrcc1Q60596 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.29■□□□□ 0.68
Xrcc1Q60596 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Xrcc1Q60596 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc1Q60596 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc1Q60596 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Xrcc1Q60596 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Xrcc1Q60596 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrcc1Q60596 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.27■□□□□ 0.68
Xrcc1Q60596 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Xrcc1Q60596 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrcc1Q60596 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrcc1Q60596 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Xrcc1Q60596 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Xrcc1Q60596 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Xrcc1Q60596 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Xrcc1Q60596 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc1Q60596 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrcc1Q60596 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Xrcc1Q60596 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Xrcc1Q60596 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrcc1Q60596 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Xrcc1Q60596 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms