Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trav7d-4Q5R1H9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-4Q5R1H9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-4Q5R1H9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-4Q5R1H9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Trav7d-4Q5R1H9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-4Q5R1H9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Gm6821-201ENSMUST00000107540 542 ntBASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-4Q5R1H9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-4Q5R1H9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-4Q5R1H9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-4Q5R1H9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-4Q5R1H9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav7d-4Q5R1H9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms