Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.66■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav15-1-dv6-1Q5R1D2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms