Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-3Q5R1C3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.06■□□□□ 0
Trav3-3Q5R1C3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav3-3Q5R1C3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Terc-201ENSMUST00000082862 423 ntBASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-3Q5R1C3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-3Q5R1C3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Grk6-206ENSMUST00000224995 2971 ntBASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Golph3-205ENSMUST00000228671 2842 ntBASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav3-3Q5R1C3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav3-3Q5R1C3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav3-3Q5R1C3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav3-3Q5R1C3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3-3Q5R1C3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav3-3Q5R1C3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-3Q5R1C3 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms