Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav8d-2Q5R1B6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trav8d-2Q5R1B6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8d-2Q5R1B6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.92■□□□□ 0.78
Trav8d-2Q5R1B6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.92■□□□□ 0.78
Trav8d-2Q5R1B6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav8d-2Q5R1B6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav8d-2Q5R1B6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav8d-2Q5R1B6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8d-2Q5R1B6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8d-2Q5R1B6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8d-2Q5R1B6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav8d-2Q5R1B6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Gm13234-201ENSMUST00000120010 747 ntBASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav8d-2Q5R1B6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.87■□□□□ 0.77
Trav8d-2Q5R1B6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8d-2Q5R1B6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.87■□□□□ 0.77
Trav8d-2Q5R1B6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8d-2Q5R1B6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8d-2Q5R1B6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav8d-2Q5R1B6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav8d-2Q5R1B6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Trav8d-2Q5R1B6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Trav8d-2Q5R1B6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav8d-2Q5R1B6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav8d-2Q5R1B6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav8d-2Q5R1B6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav8d-2Q5R1B6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav8d-2Q5R1B6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav8d-2Q5R1B6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Trav8d-2Q5R1B6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav8d-2Q5R1B6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav8d-2Q5R1B6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8d-2Q5R1B6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8d-2Q5R1B6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8d-2Q5R1B6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trav8d-2Q5R1B6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8d-2Q5R1B6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8d-2Q5R1B6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav8d-2Q5R1B6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav8d-2Q5R1B6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav8d-2Q5R1B6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.83■□□□□ 0.76
Trav8d-2Q5R1B6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav8d-2Q5R1B6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8d-2Q5R1B6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8d-2Q5R1B6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav8d-2Q5R1B6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav8d-2Q5R1B6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trav8d-2Q5R1B6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms