Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.02■□□□□ 0.8
Scn2bQ56A07 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.02■□□□□ 0.8
Scn2bQ56A07 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn2bQ56A07 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn2bQ56A07 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn2bQ56A07 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.02■□□□□ 0.8
Scn2bQ56A07 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.02■□□□□ 0.8
Scn2bQ56A07 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scn2bQ56A07 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn2bQ56A07 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn2bQ56A07 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20■□□□□ 0.79
Scn2bQ56A07 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scn2bQ56A07 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn2bQ56A07 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn2bQ56A07 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn2bQ56A07 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20■□□□□ 0.79
Scn2bQ56A07 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn2bQ56A07 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn2bQ56A07 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn2bQ56A07 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn2bQ56A07 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn2bQ56A07 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn2bQ56A07 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn2bQ56A07 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scn2bQ56A07 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.98■□□□□ 0.79
Scn2bQ56A07 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn2bQ56A07 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.97■□□□□ 0.79
Scn2bQ56A07 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn2bQ56A07 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.96■□□□□ 0.79
Scn2bQ56A07 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scn2bQ56A07 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.96■□□□□ 0.79
Scn2bQ56A07 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scn2bQ56A07 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn2bQ56A07 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.96■□□□□ 0.79
Scn2bQ56A07 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn2bQ56A07 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.95■□□□□ 0.78
Scn2bQ56A07 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.95■□□□□ 0.78
Scn2bQ56A07 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn2bQ56A07 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn2bQ56A07 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Scn2bQ56A07 Iqck-206ENSMUST00000208658 2891 ntBASIC19.93■□□□□ 0.78
Scn2bQ56A07 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms