Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tmed1Q3V009 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tmed1Q3V009 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tmed1Q3V009 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmed1Q3V009 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmed1Q3V009 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmed1Q3V009 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmed1Q3V009 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tmed1Q3V009 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmed1Q3V009 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tmed1Q3V009 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmed1Q3V009 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tmed1Q3V009 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.69■□□□□ 0.74
Tmed1Q3V009 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
Tmed1Q3V009 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tmed1Q3V009 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tmed1Q3V009 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.67■□□□□ 0.74
Tmed1Q3V009 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmed1Q3V009 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmed1Q3V009 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tmed1Q3V009 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmed1Q3V009 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tmed1Q3V009 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tmed1Q3V009 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmed1Q3V009 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.65■□□□□ 0.74
Tmed1Q3V009 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.65■□□□□ 0.74
Tmed1Q3V009 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.65■□□□□ 0.74
Tmed1Q3V009 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tmed1Q3V009 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tmed1Q3V009 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Tmed1Q3V009 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Tmed1Q3V009 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tmed1Q3V009 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tmed1Q3V009 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.64■□□□□ 0.73
Tmed1Q3V009 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.63■□□□□ 0.73
Tmed1Q3V009 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmed1Q3V009 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms